Skipp, my cheeky remark at the top of this thread wasn't supposed to give you such bad luck! Sorry
I am nowhere near to our ShopBot, and I can't go and check the accuracy of anything that follows here:
Because I also had problems finding the right terminal, I took a 12" length of scrap wire, connected one end to the ground terminal on the back of the box, then touched the other end briefly to each one of the input terminals until the screen gave the message that the E-stop had been hit. (you should see the inputs lighting up on the top left of your screen as you ground the terminals - if I recall correctly, when input 4 lights up, it also says something about the e-stop?)
The next step was to find out which pair of wires from the E-Stop were connected to a NO (normally open) switch. The easiest way to do this was to open the E-Stop housing and look at the wire colors and the NO / NC markings on the switch. You want the pair from the NO section of the switch. (The switch marking may be a symbolic open contact, rather than the abbreviation "NO")
Now this part may sound completely silly, but you must realise that the E-stop locks itself "in" mechanically once it has been pushed. The knob must be twisted to let it "out" again. I have known people to be confronted by a locked in E-Stop and then they claim that it is broken, because it is not working at all!
HAPPY HOLIDAYS